nextflow

Run computational pipelines. Mostly used for bioinformatics workflows. More information: https://www.nextflow.io.

nextflow run main.nf -resume

nextflow run user/repo -revision release_tag

nextflow run workflow -work-dir path/to/directory -with-report report.html

nextflow log

nextflow clean -force run_name

nextflow list

nextflow pull user/repo -hub bitbucket

nextflow self-update